BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C12LP1|AL428883
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1724 1747 0.0
>3x_Contig1724
Length = 20938
Score = 1747 bits (880), Expect = 0.0
Identities = 895/900 (99%), Gaps = 1/900 (0%)
Strand = Plus / Plus
Query: 1 ggagatgaggaagaatcctatttgattcaggcagggagagttatgcatatgacgttaaac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 18764 ggagatgaggaagaatcctatttgattcaggcagggagagtgatgcatatgacgttaaac 18823
Query: 61 atatgtttcaaagatcgtaacgaaagagtggatgaaaataggaaaatcggtgttttctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18824 atatgtttcaaagatcgtaacgaaagagtggatgaaaataggaaaatcggtgttttctac 18883
Query: 121 attggtacattgttgttcaagttgtacaaccggatcaaagcgtatggattattgaacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18884 attggtacattgttgttcaagttgtacaaccggatcaaagcgtatggattattgaacaac 18943
Query: 181 atgtgtaaagtgttcgaatctcatttcaatgaaatcggaccgtacctttctcgaatcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18944 atgtgtaaagtgttcgaatctcatttcaatgaaatcggaccgtacctttctcgaatcaat 19003
Query: 241 aatgatttaattgtcattcgattcaaattttacatggggctatactacgggtatgagaag 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19004 aatgatttacttgtcattcgattcaaattttacatggggctatactacgggtatgagaag 19063
Query: 301 aataactacgcattgggattcaaatggctgcmagagacttttgacatctgtaccttgtat 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 19064 aataactacgcattgggattcaaatggctgcaagagacttttgacatctgtaccttgtat 19123
Query: 361 gagagcataccttccacgtacaaggtaagaagccaagtgctaatatatctaattccaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19124 gagagcataccttccacgtacaaggtaagaagccaagtgctaatatatctaattccaatg 19183
Query: 421 aggatattacatttaagacattatccaaggttagcaccgttaagacggacatacccatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19184 aggatattacatttaagacattatccaaggttagcaccgttaagacggacatacccatca 19243
Query: 481 gtggctaaaatatacaccatgttggtgaaaagtttatgcactggcaacttgaaactctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19244 gtggctaaaatatacaccatgttggtgaaaagtttatgcactggcaacttgaaactctat 19303
Query: 541 gagaaatttattgaagacaatgagttttacctagtcaagaggaacttatacgttactgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19304 gagaaatttattgaagacaatgagttttacctagtcaagaggaacttatacgttactgtc 19363
Query: 601 ctcaagatgaaggaactagtggaattgaaacttgtgaaaaaagcttggatcttgaatgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19364 ctcaagatgaaggaactagtggaattgaaacttgtgaaaaaagcttggatcttgaatgga 19423
Query: 661 ggtaacactaaggtaccattagacatgttggcaaaagcatttcaaatatcacgaggaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19424 ggtaacactaaggtaccattagacatgttggcaaaagcatttcaaatatcacgaggaaca 19483
Query: 721 ccatgtcacgtgacagaaaatgttgccccamaccatgatcaagaactcgatgagctggaa 780
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 19484 ccatgtcacgtgacagaaaatgttgccccaaaccatgatcaagaactcgatgagctggaa 19543
Query: 781 tgtatccttgcaactttgatttcgaagaattacatcaaaggatacctatcgcattctcac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19544 tgtatccttgcaactttgatttcgaagaattacatcaaaggatacctatcgcattctcac 19603
Query: 841 agggttatgatgacgagtaaagacacccttccccggattagctaagccattggaaaggtg 900
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 19604 agggttatgatgacgagt-aagacacccttccccggattagctaagccattggaaaggtg 19662
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6843
Number of Sequences: 1807
Number of extensions: 6843
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)